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p | |
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pinder |
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pinder.core |
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pinder.core.index |
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pinder.core.index.id |
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pinder.core.index.system |
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pinder.core.index.utils |
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pinder.core.loader |
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pinder.core.loader.dataset |
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pinder.core.loader.filters |
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pinder.core.loader.geodata |
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pinder.core.loader.loader |
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pinder.core.loader.structure |
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pinder.core.loader.transforms |
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pinder.core.loader.utils |
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pinder.core.loader.writer |
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pinder.core.structure |
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pinder.core.structure.atoms |
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pinder.core.structure.contacts |
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pinder.core.structure.models |
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pinder.core.structure.superimpose |
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pinder.core.structure.surgery |
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pinder.core.submit |
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pinder.core.utils |
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pinder.core.utils.cloud |
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pinder.core.utils.constants |
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pinder.core.utils.dataclass |
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pinder.core.utils.log |
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pinder.core.utils.paths |
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pinder.core.utils.pdb_utils |
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pinder.core.utils.process |
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pinder.core.utils.retry |
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pinder.core.utils.string |
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pinder.core.utils.timer |
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pinder.core.utils.unbound |
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pinder.data |
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pinder.data.alignment_utils |
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pinder.data.annotation |
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pinder.data.annotation.canonical_apo |
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pinder.data.annotation.constants |
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pinder.data.annotation.contact_classification |
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pinder.data.annotation.detached_components |
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pinder.data.annotation.elongation |
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pinder.data.annotation.graphql |
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pinder.data.annotation.interface_gaps |
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pinder.data.annotation.planarity |
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pinder.data.annotation.sabdab |
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pinder.data.apo_utils |
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pinder.data.config |
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pinder.data.csv_utils |
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pinder.data.find_transitive_hits |
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pinder.data.foldseek_utils |
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pinder.data.get_alignment_similarity |
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pinder.data.get_annotations |
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pinder.data.get_apo |
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pinder.data.get_clusters |
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pinder.data.get_data |
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pinder.data.get_dimers |
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pinder.data.get_splits |
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pinder.data.get_test_set |
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pinder.data.graph_utils |
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pinder.data.pipeline |
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pinder.data.pipeline.cache |
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pinder.data.pipeline.constants |
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pinder.data.pipeline.data_pipeline |
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pinder.data.pipeline.scatter |
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pinder.data.pipeline.tasks |
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pinder.data.plot |
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pinder.data.plot.annotations |
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pinder.data.plot.categories |
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pinder.data.plot.constants |
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pinder.data.plot.datasets |
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pinder.data.plot.difficulty |
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pinder.data.plot.families |
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pinder.data.plot.figure_utils |
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pinder.data.plot.image |
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pinder.data.plot.leaderboards |
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pinder.data.plot.leakage |
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pinder.data.plot.performance |
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pinder.data.plot.plot |
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pinder.data.plot.run |
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pinder.data.plot.structure_case_studies |
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pinder.data.plot.validity |
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pinder.data.qc |
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pinder.data.qc.annotation_check |
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pinder.data.qc.ialign |
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pinder.data.qc.pfam_diversity |
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pinder.data.qc.run |
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pinder.data.qc.similarity_check |
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pinder.data.qc.uniprot_leakage |
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pinder.data.qc.utils |
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pinder.data.rcsb_rsync |
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pinder.data.run |
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pinder.data.system |
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pinder.eval |
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pinder.eval.clashes |
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pinder.eval.create_submission |
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pinder.eval.dockq |
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pinder.eval.dockq.biotite_dockq |
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pinder.eval.dockq.method |
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pinder.eval.dockq.metrics |
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pinder.eval.dockq.unbound |
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pinder.eval.run |
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pinder.methods |
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pinder.methods.main |
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pinder.methods.preprocess |
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pinder.methods.run |
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pinder.methods.run.af2mm |
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pinder.methods.run.frodock |
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pinder.methods.run.frodock.predict |
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pinder.methods.run.hdock |
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pinder.methods.run.hdock.predict |
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pinder.methods.run.patchdock |
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pinder.methods.run.patchdock.predict |
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pinder.methods.train |
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