All modules for which code is available
- pinder.core.index.id
- pinder.core.index.system
- pinder.core.index.utils
- pinder.core.loader.dataset
- pinder.core.loader.filters
- pinder.core.loader.geodata
- pinder.core.loader.loader
- pinder.core.loader.structure
- pinder.core.loader.transforms
- pinder.core.loader.utils
- pinder.core.loader.writer
- pinder.core.structure.atoms
- pinder.core.structure.contacts
- pinder.core.structure.models
- pinder.core.structure.superimpose
- pinder.core.structure.surgery
- pinder.core.utils.cloud
- pinder.core.utils.constants
- pinder.core.utils.dataclass
- pinder.core.utils.log
- pinder.core.utils.paths
- pinder.core.utils.pdb_utils
- pinder.core.utils.process
- pinder.core.utils.retry
- pinder.core.utils.string
- pinder.core.utils.timer
- pinder.core.utils.unbound
- pinder.data.alignment_utils
- pinder.data.annotation.canonical_apo
- pinder.data.annotation.contact_classification
- pinder.data.annotation.detached_components
- pinder.data.annotation.elongation
- pinder.data.annotation.graphql
- pinder.data.annotation.interface_gaps
- pinder.data.annotation.planarity
- pinder.data.annotation.sabdab
- pinder.data.apo_utils
- pinder.data.config
- pinder.data.csv_utils
- pinder.data.find_transitive_hits
- pinder.data.foldseek_utils
- pinder.data.get_alignment_similarity
- pinder.data.get_annotations
- pinder.data.get_apo
- pinder.data.get_clusters
- pinder.data.get_data
- pinder.data.get_dimers
- pinder.data.get_splits
- pinder.data.get_test_set
- pinder.data.graph_utils
- pinder.data.pipeline.cache
- pinder.data.pipeline.data_pipeline
- pinder.data.pipeline.scatter
- pinder.data.pipeline.tasks
- pinder.data.plot.annotations
- pinder.data.plot.categories
- pinder.data.plot.datasets
- pinder.data.plot.difficulty
- pinder.data.plot.families
- pinder.data.plot.figure_utils
- pinder.data.plot.image
- pinder.data.plot.leaderboards
- pinder.data.plot.leakage
- pinder.data.plot.performance
- pinder.data.plot.plot
- pinder.data.plot.run
- pinder.data.plot.structure_case_studies
- pinder.data.plot.validity
- pinder.data.qc.annotation_check
- pinder.data.qc.ialign
- pinder.data.qc.pfam_diversity
- pinder.data.qc.run
- pinder.data.qc.similarity_check
- pinder.data.qc.uniprot_leakage
- pinder.data.qc.utils
- pinder.data.rcsb_rsync
- pinder.data.run
- pinder.data.system
- pinder.eval.clashes
- pinder.eval.create_submission
- pinder.eval.dockq.biotite_dockq
- pinder.eval.dockq.method
- pinder.eval.dockq.metrics
- pinder.eval.dockq.unbound
- pinder.eval.run
- pinder.methods